Jul 11 – 14, 2023
Cornell University
America/New_York timezone

Visualization and quantitative evaluation of functional structures of soybean root nodules using synchrotron-based X-ray mCT and X-ray fluorescence

Jul 14, 2023, 12:00 PM
15m
Vet Research Tower (Cornell University)

Vet Research Tower

Cornell University

618 Tower Rd, Ithaca, NY 14850, USA Cornell University College of Veterinary Medicine
Oral Presentation Fundamental Research and In Vivo Studies Agricultural Engineering & Systems Modeling

Speaker

Alireza Nakhforoosh

Description

Legume-rhizobia symbiosis, the most efficient plant N2 fixing system, has been long recognized as a sustainable alternative to the use of nitrogen (N) fertilizers. Previous histological studies have provided a detailed description of anatomical structure of root nodules in 2 dimensions. Nodules consist of two functionally important tissues: (1) a central infected zone (CIZ), colonized by rhizobia bacteria, which serves as the site of N2-fixation, and (2) vascular bundles (VB), connecting the nodule with the root and plant, serving as conduits for the transport of the water and nutrients from plant to nodules, also for the translocation of the fixed-N compounds from nodule to plant. Visualizing these tissues by traditional microscopic methods involves using destructive and labor-intensive approaches for thin sectioning of nodules and staining sections. Therefore, we used synchrotron-based X-ray micro-CT (S-XRCT) and X-ray fluorescence (S-XRF) techniques for non-invasive and fast visualization of these important structures in intact soybean root nodules in both 3D and 2D. The S-XRCT imaging of root nodules at 0.7 microns spatial resolution allowed us to visualize the nodule vessels (> 7 microns diameter), and to automatically segment the VB and CIZ in the 3D reconstructed images. The elemental maps, generated by S-XRF of root nodules at 20microns resolution, revealed the unique localization of Zn and Fe within the VB and CIZ tissues, and enabled the 2D visualization of these tissues. To better understand the physiological basis of the differences observed in N-fixation of soybean genotypes, a quantitative evaluation of these tissues is essential. This study, for the first time, introduces the application of S-XRCT for volume quantification of the CIZ and VB tissues in intact soybean root nodules. The proposed methods allow for high-throughput phenotyping of the functionally important nodular structures by simultaneously imaging of multiple root nodules, enhancing the applicability of these methods.

Primary author

Co-authors

Dr Emil Hallin (Global Institute for Food Security) Dr Chithra Karunakaran (Canadian Light Source) Dr Gosia Korbas (Canadian Light Source) Mr Jarvis Stobbs (Canadian Light Source) Prof. Kochian Leon (Global Institute for Food Security)

Presentation materials

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